Proteomics and Metabolomics

Mass spectrometry-based computational approaches for large-scale identification, quantification, and functional characterization of proteins and metabolites

Proteomics and Metabolomics

Overview

Proteomics and metabolomics complement genomics by directly measuring the functional molecules in cells. Computational analysis of mass spectrometry data identifies and quantifies thousands of proteins and metabolites simultaneously.

Key Topics

  • Database searching and de novo peptide sequencing
  • Label-free and isotope-labeled quantification
  • Post-translational modification (PTM) analysis
  • Metabolite identification and pathway mapping
  • Multi-omics data integration (proteome + metabolome)
  • Structural proteomics (cross-linking MS)

Applications

  • Biomarker discovery for disease
  • Drug mechanism of action
  • Plant secondary metabolite profiling
  • Clinical diagnostics